LOCUS       ISCR1-aphA6_unit        4983 bp    DNA     linear       17-NOV-2020
DEFINITION  Providencia spp.
ACCESSION
VERSION
KEYWORDS    .
SOURCE      Providencia spp.
  ORGANISM  Providencia spp.
            Unclassified.
REFERENCE   1  (bases 1 to 4983)
  AUTHORS   Zhou,D.
  TITLE     Complete sequence of ISCR1-aphA6_unit
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4983)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2020) State Key Laboratory of Pathogen and
            Biosecurity, Beijing Institute of Microbiology and Epidemiology,
            Beijing, Beijing 100071, China
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: newbler v. 2.6
            Sequencing Technology :: Illumina
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..4983
                     /organism="Providencia spp."
                     /mol_type="genomic DNA"
     mobile_element  1..4983
                     /gene="ISCR1-aphA6 unit"
                     /product="Putative resistance unit: ISCR1-aphA6 unit"
     mobile_element  complement(1..2154)
                     /gene="ISCR1"
                     /product="Insertion sequence: ISCR1"
     CDS             381..1922
                     /gene="tnpA"
                     /codon_start=1
                     /transl_table=11
                     /product="ISCR1 transposase"
                     /translation="MSLARNATASQSPTQTNGYERHQPDQTLLYQLVEQHYPAFKASL
                     EAQGQHLPRYIQQEFNDLLQCGRLEYGFMRVRCEDCHHERLVAFSCKRRGFCPSCGAR
                     RMAESAALLIDEVFPKEPIRQWVLSFPFQLRFLLARHPQLMGQVLSIVYRTLSTHLIK
                     KAGYTKASAQTGSVTLIQRFGSALNLNVHYHMLFLDGVYAEDDYGKQRFHRVKAPTYD
                     ELNTLAHTLSHRIARCMEKRGILERDAENTWLTLEEGEDDTLTQLHGASVTYRIAVGP
                     QQGRKVFTLQTLPGREDKADSSSRVANHAGFSLHAGVMAEAHQRDKLERLCRYISRPA
                     VSEKRLALTANGQVRYELKTPYRNGTTHVIFEPLDFIAKLAALVPKPRVNLTRFHGVF
                     APNSKHRVQVTPAKRGKKPDKSEGLDTNWRDKSPAERHRAMTWMQRLKRVFNIDIEVC
                     EHCGGHVKVIASIEDPKVIEQILKHLKQKTAKANAAKQRELPPERAPPLTPSLFDPSQ
                     SRLFD"
     misc_recomb     2134..2154
                     /gene="oriIS"
                     /product="oriIS of ISCR1"
     misc_feature    2155..2490
                     /product="Truncated Enoyl-CoA hydratase (pseudogene)"
     CDS             2736..3515
                     /gene="aphA6"
                     /codon_start=1
                     /transl_table=11
                     /product="Aminoglycoside O-phosphotransferase"
                     /translation="MELPNIIQQFIGNSVLEPNKIGQSPSDVYSFNRNNETFFLKRSS
                     TLYTETTYSVSREAKMMSWLSDKLKVPELIMTFQDEQFEFMITKAINAKPISALFLTE
                     QELLSIYKETLNQLNAVAIFDCPFISSIDHRLKESKFFIDNQLLDEIDQDDFEAELWG
                     DHKTYLSLWNELNETRVEERLVFSHGDITDSNIFIDKSGEIYFLDLGRAGLADEFVDI
                     SFVERCLREDVSEETAKIFLKHLKNDMPDKRNYFLKLDELN"
     mobile_element  complement(3884..4983)
                     /gene="truncated ISAba14"
                     /product="Insertion sequence: truncated ISAba14"
     repeat_region   complement(3884..3937)
                     /gene="IRR_ISAba14"
                     /product="ISAba14 inverted repeat right"
     CDS             complement(3945..4661)
                     /gene="tnpB"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAba14 transposase TnpB"
                     /translation="MRCIDELHMQYPFAGSRMMRDLLNRQGHHIGRRHTRTLMKKMGI
                     QALYCKPNLSQANQAHRKYPYLLKGLAIQRSNQVWSTDITYIPMAKGFVYLCAVIDWH
                     SRKVLAHRVSISMEVDFCISVLNEAIEKYGSPEILNTDQGSQFTSDAFIDVLKSNGIQ
                     ISMDGKGRWVDNVMVERLWRSVKYEEVYLKAYSSVTDAKKQLSAYFEFYNLKRPHSSL
                     DKMTPNDFYYDQLPQQNKVA"
     misc_feature    complement(4772..4983)
                     /gene="truncated tnpA"
                     /product="Truncated ISAba14 transposase TnpA (pseudogene)"
BASE COUNT     1407 a   1111 c   1059 g   1406 t
ORIGIN
        1 aatatctcct tttgggttgt taataaaaca tccaataagt tgactgtgcg tgaaaaagaa
       61 agttttgtgt gatggcgttg aagatcgcac cgttaagctc ttatgtggga tggtgcagag
      121 ctcgacgact accgataaaa cgcaaccgcc gcaaacagac aagaaaaagc cccaactgat
      181 aacagttggg gcttcagtat tgtgattggt ggagcaatag caccctgaac ccaaaacctt
      241 ctcgctcaac cggtagtggc tgataacaac tcgtgagggc tattgcgggt taagcattta
      301 gcgatgtcta gggccagact ggacgtctga acgcaagccg ctgatactgt acataaccac
      361 agtatcagcg gaggataccc atgtcgctgg caaggaacgc cacggcgagt caatcgccca
      421 ctcaaacaaa cggttacgaa cgccaccaac ccgaccagac gctgctctac cagctggttg
      481 agcagcacta cccagccttc aaagcctcac tcgaagccca aggtcaacac ctgcctcgct
      541 acatccaaca agaattcaac gacctcctcc aatgtggccg tctggagtat ggtttcatgc
      601 gggttcgctg cgaggattgt catcacgagc gtctggtcgc cttcagctgt aaacgacgcg
      661 gcttttgccc tagctgcggt gcccgccgga tggccgagag tgcggcgctg ctgatagacg
      721 aagtcttccc caaggagccc attcgccagt gggtgctcag ctttcctttc cagctacgct
      781 ttttgctggc tcgccatccc cagctgatgg gccaggtctt gagtatcgtc tatcgtacac
      841 tctcaactca tctgatcaaa aaagccggtt acaccaaagc ctctgcacaa actggctcag
      901 tgactcttat ccaacgcttt ggctccgcgc taaatctcaa tgtccactac cacatgctgt
      961 ttctcgatgg tgtctatgcc gaagatgact atggcaagca acgcttccat cgtgtcaagg
     1021 cacccactta cgatgagctg aatacgctcg ctcacaccct cagccatcgc atcgctcgct
     1081 gcatggaaaa gcgtgggatt ttggagcgtg atgccgagaa tacgtggttg acactggaag
     1141 agggcgaaga cgatacgctg actcaattac atggtgcttc ggttacgtat cgcattgccg
     1201 tcggccccca gcaagggcgc aaagtcttca ccctgcaaac cttgccaggg cgtgaggata
     1261 aagccgactc aagcagtcga gtagccaacc atgctggttt ctcgctacac gccggtgtga
     1321 tggccgaagc gcatcagcgg gataagcttg agcgcttgtg tcgctacatt agtcggccag
     1381 cggtttcaga aaaacgtctg gcattaaccg ccaatgggca ggtgcgttac gagctcaaaa
     1441 ctccgtaccg caatggcacc acccatgtga tcttcgagcc gctggacttc atcgccaaac
     1501 tcgctgcgtt ggtacctaag ccgcgagtca acctcacacg cttccacggc gtctttgcac
     1561 cgaacagcaa acaccgagtt caagtaacac ccgccaagcg gggcaagaag cccgacaaat
     1621 cggaaggtct cgatactaac tggcgtgaca agagtcctgc agagcgccac cgcgccatga
     1681 cctggatgca acgcctcaag cgagtcttca atattgatat tgaagtctgc gaacactgcg
     1741 gcggtcacgt caaagtgatt gccagcatcg aagatccgaa ggtcattgag cagattctca
     1801 agcatctgaa acagaaaaca gccaaggcga atgccgccaa gcagcgtgag ctgccaccag
     1861 aacgagcgcc gccactgact cccagcctgt tcgatccatc acagagtcgt ctctttgact
     1921 gacgacccca aatccaacac tgctcaacac tgccaacttt taaacggggc ggtggggcag
     1981 tttgtatctc tcgagctatc aggctagaga ttttaccgcc aaatcgaacc ttattagagc
     2041 ggtttaggct ggaccggcag ttaaaattgg ggcttgagcg gtaaacgagt gagggaattt
     2101 caggtaagat acttcggatg aggagcaaaa aggtggttta tacttcctat acccgaggta
     2161 attcttggtg ctgaccttat tgacgctttg ctagccgaac gatatggttg ggtaaatcgt
     2221 gcgcttccgg caaatgagtt agacgctttt gttcatcgca tcgccacaaa tattgcagct
     2281 ttacctgaag gggtcatcgc cgctgcaaag aaagcaatcc caccaacgga tttaagtgaa
     2341 gacttccttc gagagcacaa ggcatgggct ggtctgtttg cgcgtccggc tgctgaaaaa
     2401 ctcattcgtg gcggcttgca ggcaggtgct caaacaaaag tgggcgaaca ggatttggag
     2461 caactactcc gcgatttgtc tgcatcctga ggtcttgctg ctgtctaata ttctgctcta
     2521 gcttattctt gagatttgag acagagaaat acagcaaccc attttcctta agcctagcgc
     2581 tatttatgca attgagaggt aatgacaaaa gtttgatgca ttgaccctct atagacaata
     2641 agccatattt ttgctacagt gaacctaatt aagatcatct atttactagg cctcgcattt
     2701 gcgaggtttt taatgctgaa taaaaggaaa acttgatgga attgcctaat attattcaac
     2761 aatttattgg aaacagcgtt ttagagccaa ataaaattgg tcagtcgcca tcggatgttt
     2821 attcttttaa tcgaaataat gaaacttttt ttcttaagcg atctagcact ttatatacag
     2881 agaccacata cagtgtctct cgtgaagcga aaatgatgag ttggctctct gataaattaa
     2941 aggtgcctga actcatcatg acttttcagg atgagcagtt tgaattcatg atcactaaag
     3001 cgatcaatgc aaaaccaatt tcagcgcttt ttttaacaga gcaagaattg ctttctatct
     3061 ataaggaaac actcaatcag ttaaatgcag ttgctatttt tgattgccca tttatttcaa
     3121 gcattgatca tcggttaaaa gagtcaaaat tttttattga taaccaactc cttgacgaga
     3181 tagatcaaga tgattttgag gctgaattat ggggagacca taaaacttac ctaagtcttt
     3241 ggaatgagtt aaatgagact cgtgttgaag aaagattggt tttttctcat ggcgatatca
     3301 cggatagtaa tatttttata gataaatctg gtgaaattta ctttttagat cttggtcgtg
     3361 ctggattagc agatgaattt gtagatatat cttttgttga acgttgccta agagaggatg
     3421 tatctgagga aactgctaaa atatttttaa agcatttaaa aaacgatatg cctgacaaaa
     3481 ggaattattt tttaaaactt gatgaattga attaactcca agcaatatct aaaaatactt
     3541 agctgtattt ttaagttgct aatttttaaa taaataagtg aaaaaagtta gtggaactac
     3601 tgatttaaag ttttatatag ccaataaatc taaattttgg tttttaaaat gaacttattt
     3661 aaaatagcta aagctgttta ttagcttaac ttgtgattta agtttttttg aatataaaat
     3721 tgttaattta ttagctttac aagtttattt aaatttcatc gtgcaacatt tttaaccaat
     3781 tttattatcg atggtatttt tttgtctgct tttcttttcc tagtctttta tctatccgtc
     3841 aaccatatag tattttatta aattcttatg ggaaatgacg aatagaggtg gtcccacttg
     3901 tttgaacaac taaaagcgta tttataagtg atattccgct ctagttaagc caccttgttt
     3961 tgttggggta gctgatcata gtaaaaatca tttggtgtca ttttgtctag actcgaatga
     4021 ggtcgtttca aattataaaa ctcaaaatat gcacttaatt gctttttcgc atctgtgaca
     4081 ctgctataag ctttgagata cacctcttca tatttaacgc tccgccataa tcgttcaacc
     4141 atcacattat ctacccatcg acctttacca tccatactga tttgaatgcc atttgatttc
     4201 aatacatcaa taaatgcatc actggtgaac tgactgcctt ggtctgtatt caatatttca
     4261 ggtgatccat atttttcaat cgcttcattt aaaaccgaaa tacaaaaatc cacctccata
     4321 ctaatcgata ccctatgcgc aagtaccttg cggctatgcc aatcaatcac agcacataaa
     4381 taaacaaagc cttttgccat agggatatac gttatatccg tagaccacac ttgattactg
     4441 cgctgaatag ccaacccttt gagcagatat ggatatttac ggtgagcttg attagcctgg
     4501 cttaaatttg gtttgcaata taacgcctga atacccattt tcttcattaa agtacgtgta
     4561 tgacgtcgtc ctatatgatg cccttgacga ttcaacaaat cacgcatcat acgactgcct
     4621 gcaaaaggat attgcatatg taattcatca atacatcgca tcagcttcag atctgatgag
     4681 ctaacaggtt ttgggcgata ataataacaa ccacgggaga ctttcagcag cttagcttgc
     4741 ttagatactg aaatctgaag tgagtcgtcg attaactttt gtggttgaag cggcccagtt
     4801 tcttcaacac accttctaaa aaatcaattt ctaatgcctg ctcaccgatt tttgcatgta
     4861 actttttaag atcaatgggg ggttctgatg gagcttttga ttgatcgaaa gcttgcgagg
     4921 aagctgagat caattgattt ttccagtcaa taatttggtt ttgatgaaca tcaaattcag
     4981 cac
//
